In silico toxicology protocols
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In: Regulatory toxicology and pharmacology : RTP, Vol. 96, 01.07.2018, p. 1-17.
Research output: Journal contributions › Journal articles › Research › peer-review
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TY - JOUR
T1 - In silico toxicology protocols
AU - Myatt, Glenn J.
AU - Ahlberg, Ernst
AU - Akahori, Yumi
AU - Allen, David
AU - Amberg, Alexander
AU - Anger, Lennart T.
AU - Aptula, Aynur
AU - Auerbach, Scott
AU - Beilke, Lisa
AU - Bellion, Phillip
AU - Benigni, Romualdo
AU - Bercu, Joel
AU - Booth, Ewan D.
AU - Bower, Dave
AU - Brigo, Alessandro
AU - Burden, Natalie
AU - Cammerer, Zoryana
AU - Cronin, Mark T.D.
AU - Cross, Kevin P.
AU - Custer, Laura
AU - Dettwiler, Magdalena
AU - Dobo, Krista
AU - Ford, Kevin A.
AU - Fortin, Marie C.
AU - Gad-McDonald, Samantha E.
AU - Gellatly, Nichola
AU - Gervais, Véronique
AU - Glover, Kyle P.
AU - Glowienke, Susanne
AU - Van Gompel, Jacky
AU - Gutsell, Steve
AU - Hardy, Barry
AU - Harvey, James S.
AU - Hillegass, Jedd
AU - Honma, Masamitsu
AU - Hsieh, Jui Hua
AU - Hsu, Chia Wen
AU - Hughes, Kathy
AU - Johnson, Candice
AU - Jolly, Robert
AU - Jones, David
AU - Kemper, Ray
AU - Kenyon, Michelle O.
AU - Kim, Marlene T.
AU - Kruhlak, Naomi L.
AU - Kulkarni, Sunil A.
AU - Kümmerer, Klaus
AU - Leavitt, Penny
AU - Majer, Bernhard
AU - Masten, Scott
AU - Miller, Scott
AU - Moser, Janet
AU - Mumtaz, Moiz
AU - Muster, Wolfgang
AU - Neilson, Louise
AU - Oprea, Tudor I.
AU - Patlewicz, Grace
AU - Paulino, Alexandre
AU - Lo Piparo, Elena
AU - Powley, Mark
AU - Quigley, Donald P.
AU - Reddy, M. Vijayaraj
AU - Richarz, Andrea Nicole
AU - Ruiz, Patricia
AU - Schilter, Benoit
AU - Serafimova, Rositsa
AU - Simpson, Wendy
AU - Stavitskaya, Lidiya
AU - Stidl, Reinhard
AU - Suarez-Rodriguez, Diana
AU - Szabo, David T.
AU - Teasdale, Andrew
AU - Trejo-Martin, Alejandra
AU - Valentin, Jean Pierre
AU - Vuorinen, Anna
AU - Wall, Brian A.
AU - Watts, Pete
AU - White, Angela T.
AU - Wichard, Joerg
AU - Witt, Kristine L.
AU - Woolley, Adam
AU - Woolley, David
AU - Zwickl, Craig
AU - Hasselgren, Catrin
N1 - Publisher Copyright: © 2018 The Authors
PY - 2018/7/1
Y1 - 2018/7/1
N2 - The present publication surveys several applications of in silico (i.e., computational) toxicology approaches across different industries and institutions. It highlights the need to develop standardized protocols when conducting toxicity-related predictions. This contribution articulates the information needed for protocols to support in silico predictions for major toxicological endpoints of concern (e.g., genetic toxicity, carcinogenicity, acute toxicity, reproductive toxicity, developmental toxicity) across several industries and regulatory bodies. Such novel in silico toxicology (IST) protocols, when fully developed and implemented, will ensure in silico toxicological assessments are performed and evaluated in a consistent, reproducible, and well-documented manner across industries and regulatory bodies to support wider uptake and acceptance of the approaches. The development of IST protocols is an initiative developed through a collaboration among an international consortium to reflect the state-of-the-art in in silico toxicology for hazard identification and characterization. A general outline for describing the development of such protocols is included and it is based on in silico predictions and/or available experimental data for a defined series of relevant toxicological effects or mechanisms. The publication presents a novel approach for determining the reliability of in silico predictions alongside experimental data. In addition, we discuss how to determine the level of confidence in the assessment based on the relevance and reliability of the information.
AB - The present publication surveys several applications of in silico (i.e., computational) toxicology approaches across different industries and institutions. It highlights the need to develop standardized protocols when conducting toxicity-related predictions. This contribution articulates the information needed for protocols to support in silico predictions for major toxicological endpoints of concern (e.g., genetic toxicity, carcinogenicity, acute toxicity, reproductive toxicity, developmental toxicity) across several industries and regulatory bodies. Such novel in silico toxicology (IST) protocols, when fully developed and implemented, will ensure in silico toxicological assessments are performed and evaluated in a consistent, reproducible, and well-documented manner across industries and regulatory bodies to support wider uptake and acceptance of the approaches. The development of IST protocols is an initiative developed through a collaboration among an international consortium to reflect the state-of-the-art in in silico toxicology for hazard identification and characterization. A general outline for describing the development of such protocols is included and it is based on in silico predictions and/or available experimental data for a defined series of relevant toxicological effects or mechanisms. The publication presents a novel approach for determining the reliability of in silico predictions alongside experimental data. In addition, we discuss how to determine the level of confidence in the assessment based on the relevance and reliability of the information.
KW - Computational toxicology
KW - Expert alert
KW - Expert review
KW - In silico
KW - In silico toxicology
KW - Predictive toxicology
KW - QSAR
KW - Chemistry
UR - http://www.scopus.com/inward/record.url?scp=85046116125&partnerID=8YFLogxK
UR - https://www.mendeley.com/catalogue/8ee5e0a9-2ff5-3cc1-8d23-173d844b2a94/
U2 - 10.1016/j.yrtph.2018.04.014
DO - 10.1016/j.yrtph.2018.04.014
M3 - Journal articles
C2 - 29678766
AN - SCOPUS:85046116125
VL - 96
SP - 1
EP - 17
JO - Regulatory toxicology and pharmacology : RTP
JF - Regulatory toxicology and pharmacology : RTP
SN - 0273-2300
ER -